STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4530Hypothetical protein; Predicted permeases. (300 aa)    
Predicted Functional Partners:
ACPL_7154
Malate dehydrogenase (oxaloacetate-decarboxylating); Malic enzyme.
  
  
 0.811
ACPL_7551
Malate dehydrogenase (oxaloacetate-decarboxylating); Malic enzyme.
  
  
 0.811
ACPL_4529
Hypothetical protein.
       0.752
nonF
Uncharacterized protein; Putative intracellular protease/amidase.
       0.546
ACPL_4528
Transcriptional regulator.
       0.546
dhaR-2
HTH-type transcriptional repressor dhaR; Transcriptional regulator.
       0.484
mcr
alpha-methylacyl-CoA racemase; Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
  
 0.414
ACPL_3226
Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
  
 0.414
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.