STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4539Fibronectin, type III domain-containing protein; Uncharacterized protein contain chitin-binding domain type 3. (131 aa)    
Predicted Functional Partners:
ACPL_5542
O-antigen polymerase.
  
     0.722
ACPL_5641
Putative lipopolysaccharide biosynthesis protein; Lipid A core - O-antigen ligase and related enzymes.
  
     0.616
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.569
ACPL_2007
Hypothetical protein.
  
     0.564
ACPL_2926
HTH-type transcriptional regulator malT; DNA-binding HTH domain-containing proteins.
  
     0.550
ACPL_4538
Glucomannan 4-beta-mannosyltransferase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
       0.542
ACPL_3841
Endo-1,4-beta-xylanase; Beta-1,4-xylanase.
   
   0.532
ACPL_5001
Endoglucanase; Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.527
ACPL_4540
Hypothetical protein.
       0.524
ACPL_6556
Large exoproteins involved in heme utilization or adhesion.
  
     0.523
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.