Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4543Hypothetical protein; ABC-type sugar transport systems, ATPase components. (383 aa)    
Predicted Functional Partners:
ACPL_4545
Methyl-accepting chemotaxis protein 3; Type V secretory pathway, adhesin AidA.
   
 0.978
ACPL_4542
Hypothetical protein.
 
     0.957
ACPL_4546
Hypothetical protein.
 
 
   0.932
ACPL_4547
Hypothetical protein.
 
 
   0.885
ndhD
NAD(P)H-quinone oxidoreductase chain 4; Similar to chloroplast protein; Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.648
ACPL_7314
Histone-lysine N-methyltransferase MLL3.
  
    0.607
ACPL_7611
Superfamily I DNA and RNA helicases.
  
 
 0.591
chiA-3
Chitinase; Belongs to the glycosyl hydrolase 18 family.
    
 
 0.572
ACPL_5371
Polycystic kidney disease protein 1-like 3; Predicted drug exporters of the RND superfamily.
  
     0.560
ACPL_4541
Hypothetical protein.
       0.558
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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