STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4556Spermidine/putrescine import ATP-binding protein potA; ABC-type spermidine/putrescine transport systems, ATPase components. (330 aa)    
Predicted Functional Partners:
ACPL_4557
ABC-type multidrug transport system, permease component.
 
 
 0.972
pdr1-2
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
 
 0.880
drrB
Daunorubicin resistance transmembrane protein; ABC-type multidrug transport system, permease component.
 
 
 0.877
pdr1
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
 
  0.869
pdr1-4
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
  
 0.861
ACPL_4555
Hypothetical protein.
 
   
 0.721
pdr1-3
Pleiotropic drug resistance protein 1; ABC-type multidrug transport system, permease component.
 
 
 0.625
ACPL_4554
Hypothetical protein.
       0.594
ACPL_619
Antibiotic transport system permease protein; Putative exporter of polyketide antibiotics.
 
 
 0.592
ACPL_6870
Pleiotropic drug resistance protein 3; ABC-type multidrug transport system, permease component.
 
 
 0.585
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.