STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4559Hypothetical protein; Predicted thioesterase. (152 aa)    
Predicted Functional Partners:
pks2A
Polyketide synthase modules and related proteins.
  
 
 0.979
pks1B
Polyketide synthase modules and related proteins.
  
 
 0.957
pks3B
Polyketide synthase modules and related proteins.
  
 
 0.957
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.936
pks3C
Polyketide synthase modules and related proteins.
  
 
 0.901
pks1E
Putative type-I PKS; Polyketide synthase modules and related proteins.
  
 
 0.868
pks1A
Polyketide synthase modules and related proteins.
  
 
 0.868
pks1D
Polyketide synthase modules and related proteins.
  
 
 0.672
pks1C
Polyketide synthase modules and related proteins.
  
 
 0.672
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.614
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.