Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACPL_4565Transcriptional regulators. (180 aa)    
Predicted Functional Partners:
fabG-3
3-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.569
ACPL_4567
Hypothetical protein.
  
    0.546
ACPL_4568
Putative N-acetyltransferase; Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.538
ACPL_4446
Hypothetical protein.
  
     0.497
ACPL_1110
Regulatory protein; Predicted transcriptional regulators.
  
 
   0.445
ACPL_4900
Hypothetical protein.
  
     0.420
ACPL_862
Hypothetical protein.
  
     0.420
ACPL_5110
Nuclear export factor GLE1.
  
     0.418
ACPL_4447
Non-hemolytic phospholipase C.
  
     0.400
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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