STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4585VanZ family protein; Glycopeptide antibiotics resistance protein. (238 aa)    
Predicted Functional Partners:
ACPL_4776
Hypothetical protein.
  
     0.596
ACPL_2356
Hypothetical protein.
  
     0.580
ACPL_2457
Laminin subunit alpha-2.
  
     0.563
ACPL_2677
Ymge-like uncharacterized protein.
  
     0.537
ACPL_5041
Hypothetical protein.
  
     0.537
ACPL_8283
Hypothetical protein.
  
     0.533
ACPL_4586
Sulfurtransferase tusA; Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
       0.509
ACPL_8065
Hypothetical protein.
      
 0.459
ACPL_5110
Nuclear export factor GLE1.
  
     0.442
ACPL_2441
Hypothetical protein.
  
     0.440
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.