STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4639Ubiquinone/menaquinone biosynthesis methyltransferase ubiE; SAM-dependent methyltransferases. (239 aa)    
Predicted Functional Partners:
ACPL_4640
Alkanal monooxygenase (FMN-linked); Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
       0.752
ACPL_4638
Hypothetical protein.
       0.572
ACPL_3167
Uncharacterized protein conserved in bacteria.
  
     0.476
ACPL_4641
Hypothetical protein.
       0.476
ACPL_4637
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
       0.465
ACPL_4414
Uncharacterized protein; Predicted nucleotidyltransferase.
  
     0.456
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
     
 0.454
ACPL_6251
L-threonine 3-dehydrogenase; Zn-dependent alcohol dehydrogenases.
  
     0.453
ACPL_2645
Hypothetical protein.
  
     0.439
cypC
CypC; Cytochrome P450.
  
 
   0.412
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.