STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_464Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA. (838 aa)    
Predicted Functional Partners:
ACPL_6493
Collagen alpha-5(VI) chain.
  
 
   0.698
ACPL_8096
Secretion protein snm4.
 
   
 0.685
ACPL_7250
Protein of unknown function DUF820; Uncharacterized protein conserved in cyanobacteria.
  
     0.648
ACPL_6940
Rhs family protein.
  
 
   0.632
ACPL_466
Uncharacterized protein conserved in bacteria; Belongs to the WXG100 family.
 
   
 0.610
ACPL_374
Hypothetical protein.
  
     0.594
ACPL_6936
Putative ATP-dependent helicase; Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.579
ACPL_8081
Hypothetical protein.
  
     0.576
ACPL_463
Predicted membrane protein.
       0.575
ACPL_1598
Hypothetical protein.
 
 
 
 0.572
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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