STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_466Uncharacterized protein conserved in bacteria; Belongs to the WXG100 family. (97 aa)    
Predicted Functional Partners:
ACPL_465
Uncharacterized protein conserved in bacteria; Belongs to the WXG100 family.
  
 
 0.993
ACPL_1598
Hypothetical protein.
 
 
 0.781
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
 
   
 0.610
ACPL_8096
Secretion protein snm4.
 
   
 0.610
ACPL_1775
ATPases involved in chromosome partitioning.
 
 
 
 0.587
ACPL_8097
Protein essC; DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 
 0.587
ACPL_7250
Protein of unknown function DUF820; Uncharacterized protein conserved in cyanobacteria.
  
     0.584
ACPL_6098
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 
 0.582
ACPL_1600
DNA segregation ATPase FtsK/SpoIIIE and related proteins.
 
 
 
 0.572
ACPL_7045
Hypothetical protein; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.558
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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