STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxRferredoxin-NADP+ reductase; NADPH-dependent glutamate synthase beta chain and related oxidoreductases. (449 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase domain 2.
  
 
 0.998
ACPL_7561
Hypothetical protein.
  
  
 0.907
bedB
Benzene 1,2-dioxygenase system ferredoxin subunit; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
     
 0.904
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.897
nirA
Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.897
fhbA
Flavohemoprotein; Sulfite reductase, alpha subunit (flavoprotein).
  
 
 0.887
paaK
Phenylacetic acid degradation NADH oxidoreductase; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.745
ACPL_5396
Oxidoreductase FAD-binding domain protein; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 0.745
ACPL_5846
Hypothetical protein.
    
 0.701
fixA
Protein fixA; Electron transfer flavoprotein, beta subunit.
  
 
 0.652
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.