STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4680Hypothetical protein. (272 aa)    
Predicted Functional Partners:
ACPL_4679
Acyl-CoA dehydrogenase.
       0.682
ACPL_5421
Hypothetical protein.
  
     0.546
ACPL_4681
Hypothetical protein.
       0.518
gadB
Glutamate decarboxylase and related PLP-dependent proteins; Belongs to the group II decarboxylase family.
  
     0.469
ACPL_4678
Hypothetical protein.
       0.464
ACPL_4983
Hypothetical protein.
  
     0.451
ACPL_1961
Hypothetical protein.
  
     0.442
ACPL_323
Hypothetical protein; ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.441
ACPL_4537
HTH-type transcriptional regulator malT; Predicted ATPase.
  
     0.434
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.