STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_469Hypothetical protein. (120 aa)    
Predicted Functional Partners:
ACPL_468
Hypothetical protein.
 
     0.951
ACPL_2795
Serine/threonine-protein kinase MRCK gamma; Methyl-accepting chemotaxis protein.
  
     0.768
ACPL_7857
GCN5-related N-acetyltransferase; Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.714
ACPL_1271
Uncharacterized protein; Glucitol operon activator.
  
     0.699
ACPL_814
Hypothetical protein.
  
     0.659
ACPL_8083
Hypothetical protein.
  
     0.655
ACPL_8273
Cholinephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.654
ACPL_7420
Laminin subunit alpha-3; AAA ATPase containing von Willebrand factor type A (vWA) domain.
  
     0.645
ACPL_416
Hypothetical protein.
  
     0.642
ACPL_1967
Protein of unknown function DUF88.
  
     0.624
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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