STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4710UDP-glucose 4-epimerase; Nucleoside-diphosphate-sugar epimerases. (339 aa)    
Predicted Functional Partners:
ACPL_4711
Hypothetical protein.
 
   
 0.973
ACPL_4709
Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.963
ACPL_4708
Uncharacterized protein conserved in bacteria.
 
   
 0.959
ACPL_4706
Hypothetical protein; Sulfite oxidase and related enzymes.
 
     0.926
rmlD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
 0.924
ACPL_3183
dTDP-4-dehydrorhamnose reductase.
  
 0.924
ACPL_4291
dTDP-4-dehydrorhamnose reductase.
  
 0.924
ACPL_4707
3-demethylubiquinone-9 3-methyltransferase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase.
 
     0.924
rmlC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
 
 0.869
rmlB
dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.827
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.