STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4729alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase. (489 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.800
uxaC
Glucuronate isomerase.
     
  0.800
araA-2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.800
ACPL_3002
Hypothetical protein.
  
     0.749
abfB-3
Arabinofuranosidase.
  
   
 0.731
ACPL_3011
Hypothetical protein; Poly(3-hydroxybutyrate) depolymerase.
  
     0.717
abfB-2
Arabinofuranosidase.
 
    0.712
celD-2
Endoglucanase E-4; Cellobiohydrolase A (1,4-beta-cellobiosidase A).
 
     0.711
ACPL_3005
Endoglucanase.
     0.704
xlnB
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.694
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.