STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4733Hypothetical protein. (142 aa)    
Predicted Functional Partners:
ACPL_826
Ribonuclease; Guanyl-specific ribonuclease Sa.
  
     0.607
ACPL_5473
O-phthalyl amidase; Uncharacterized protein conserved in bacteria.
  
     0.568
ACPL_3480
Guanine-specific ribonuclease N1 and T1.
  
     0.552
ACPL_3721
Hypothetical protein.
  
     0.545
fabH-2
3-oxoacyl-[acyl-carrier-protein] synthase III.
       0.536
ACPL_1532
Uncharacterized protein.
  
  
 0.514
ACPL_8193
Hypothetical protein; Regulator of competence-specific genes.
 
     0.448
ACPL_3016
Hypothetical protein.
  
     0.437
ACPL_4432
Hypothetical protein.
 
     0.427
ACPL_874
Nudix hydrolase 6; NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.410
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.