erf1 protein (Actinoplanes sp. SE50110) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

erf1

Peptide chain release factor 1 (eRF1). (374 aa)

Predicted Functional Partners:

rpsC

0.655

rplW

0.596

rplJ

0.590

rpmD

0.578

rpsB

0.573

ACPL_4740

0.551

ACPL_2659

0.550

ACPL_4738

0.542

rpsE

0.539

rplE

0.538

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_2659	erf1	ACPL_2659	ACPL_4739	Hypothetical protein.	Peptide chain release factor 1 (eRF1).	0.550
ACPL_4738	ACPL_4740	ACPL_4738	ACPL_4740	Proline iminopeptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.	Hypothetical protein.	0.400
ACPL_4738	erf1	ACPL_4738	ACPL_4739	Proline iminopeptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.	Peptide chain release factor 1 (eRF1).	0.542
ACPL_4740	ACPL_4738	ACPL_4740	ACPL_4738	Hypothetical protein.	Proline iminopeptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.	0.400
ACPL_4740	erf1	ACPL_4740	ACPL_4739	Hypothetical protein.	Peptide chain release factor 1 (eRF1).	0.551
erf1	ACPL_2659	ACPL_4739	ACPL_2659	Peptide chain release factor 1 (eRF1).	Hypothetical protein.	0.550
erf1	ACPL_4738	ACPL_4739	ACPL_4738	Peptide chain release factor 1 (eRF1).	Proline iminopeptidase; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.	0.542
erf1	ACPL_4740	ACPL_4739	ACPL_4740	Peptide chain release factor 1 (eRF1).	Hypothetical protein.	0.551
erf1	rplE	ACPL_4739	ACPL_794	Peptide chain release factor 1 (eRF1).	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.538
erf1	rplJ	ACPL_4739	ACPL_771	Peptide chain release factor 1 (eRF1).	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.590
erf1	rplW	ACPL_4739	ACPL_784	Peptide chain release factor 1 (eRF1).	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.596
erf1	rpmD	ACPL_4739	ACPL_800	Peptide chain release factor 1 (eRF1).	50S ribosomal protein L30.	0.578
erf1	rpsB	ACPL_4739	ACPL_7261	Peptide chain release factor 1 (eRF1).	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.573
erf1	rpsC	ACPL_4739	ACPL_788	Peptide chain release factor 1 (eRF1).	Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.655
erf1	rpsE	ACPL_4739	ACPL_799	Peptide chain release factor 1 (eRF1).	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.539
rplE	erf1	ACPL_794	ACPL_4739	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Peptide chain release factor 1 (eRF1).	0.538
rplE	rplJ	ACPL_794	ACPL_771	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.994
rplE	rplW	ACPL_794	ACPL_784	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplE	rpmD	ACPL_794	ACPL_800	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L30.	0.998
rplE	rpsB	ACPL_794	ACPL_7261	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.996