STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4770Glycerol kinase; Sugar (pentulose and hexulose) kinases. (538 aa)    
Predicted Functional Partners:
araD
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.837
araA-2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.750
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.738
ACPL_4771
Predicted integral membrane protein.
       0.580
yic1
Alpha-xylosidase; Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.563
ACPL_5519
alpha-N-arabinofuranosidase; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.562
glpD
Glycerol-3-phosphate dehydrogenase.
  
 
 0.550
glpD-2
Glycerol-3-phosphate dehydrogenase.
  
 
 0.550
glpD-3
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.550
fucA
L-fuculose-phosphate aldolase; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
 
  
 0.539
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.