ACPL_4776 protein (Actinoplanes sp. SE50110)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ACPL_4776

Hypothetical protein. (509 aa)

Predicted Functional Partners:

ACPL_5487

0.622

ACPL_6765

0.612

efp

0.610

ACPL_4585

0.596

ACPL_430

0.538

ACPL_4501

0.524

ACPL_4317

0.500

ACPL_2126

0.482

ACPL_5333

0.448

ACPL_1184

0.435

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_1184	ACPL_4776	ACPL_1184	ACPL_4776	Hypothetical protein.	Hypothetical protein.	0.435
ACPL_2126	ACPL_4776	ACPL_2126	ACPL_4776	Acyl-CoA dehydrogenases.	Hypothetical protein.	0.482
ACPL_430	ACPL_4776	ACPL_430	ACPL_4776	Leucine rich repeat variant; Predicted NTPase (NACHT family).	Hypothetical protein.	0.538
ACPL_430	ACPL_5333	ACPL_430	ACPL_5333	Leucine rich repeat variant; Predicted NTPase (NACHT family).	WGR domain protein.	0.406
ACPL_430	ACPL_5487	ACPL_430	ACPL_5487	Leucine rich repeat variant; Predicted NTPase (NACHT family).	Acetoacetate decarboxylase.	0.533
ACPL_430	ACPL_6765	ACPL_430	ACPL_6765	Leucine rich repeat variant; Predicted NTPase (NACHT family).	Hypothetical protein; Predicted NTPase (NACHT family).	0.729
ACPL_4317	ACPL_4776	ACPL_4317	ACPL_4776	Hypothetical protein; Predicted HD-superfamily hydrolase.	Hypothetical protein.	0.500
ACPL_4501	ACPL_4776	ACPL_4501	ACPL_4776	Hypothetical protein.	Hypothetical protein.	0.524
ACPL_4585	ACPL_4776	ACPL_4585	ACPL_4776	VanZ family protein; Glycopeptide antibiotics resistance protein.	Hypothetical protein.	0.596
ACPL_4776	ACPL_1184	ACPL_4776	ACPL_1184	Hypothetical protein.	Hypothetical protein.	0.435
ACPL_4776	ACPL_2126	ACPL_4776	ACPL_2126	Hypothetical protein.	Acyl-CoA dehydrogenases.	0.482
ACPL_4776	ACPL_430	ACPL_4776	ACPL_430	Hypothetical protein.	Leucine rich repeat variant; Predicted NTPase (NACHT family).	0.538
ACPL_4776	ACPL_4317	ACPL_4776	ACPL_4317	Hypothetical protein.	Hypothetical protein; Predicted HD-superfamily hydrolase.	0.500
ACPL_4776	ACPL_4501	ACPL_4776	ACPL_4501	Hypothetical protein.	Hypothetical protein.	0.524
ACPL_4776	ACPL_4585	ACPL_4776	ACPL_4585	Hypothetical protein.	VanZ family protein; Glycopeptide antibiotics resistance protein.	0.596
ACPL_4776	ACPL_5333	ACPL_4776	ACPL_5333	Hypothetical protein.	WGR domain protein.	0.448
ACPL_4776	ACPL_5487	ACPL_4776	ACPL_5487	Hypothetical protein.	Acetoacetate decarboxylase.	0.622
ACPL_4776	ACPL_6765	ACPL_4776	ACPL_6765	Hypothetical protein.	Hypothetical protein; Predicted NTPase (NACHT family).	0.612
ACPL_4776	efp	ACPL_4776	ACPL_6481	Hypothetical protein.	Elongation factor EF-P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	0.610
ACPL_5333	ACPL_430	ACPL_5333	ACPL_430	WGR domain protein.	Leucine rich repeat variant; Predicted NTPase (NACHT family).	0.406