Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_478Septum site-determining protein minD; Septum formation inhibitor-activating ATPase. (356 aa)    
Predicted Functional Partners:
ACPL_479
Flp pilus assembly protein, ATPase CpaF.
       0.843
ACPL_480
Flp pilus assembly protein TadB.
 
     0.838
parB
Putative chromosome-partitioning protein parB; Predicted transcriptional regulators; Belongs to the ParB family.
  
 
 0.736
ACPL_481
Type II secretion system protein; Flp pilus assembly protein TadC.
 
     0.733
ACPL_7626
Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.
  
  
 0.644
ACPL_476
Elongation factor G; Phosphoserine phosphatase.
     
 0.554
ACPL_1534
Uncharacterized protein.
  
    0.547
ACPL_6362
Replicase polyprotein 1ab; AAA ATPase containing von Willebrand factor type A (vWA) domain.
 
 
 
 0.547
ACPL_7442
Uncharacterized protein.
  
     0.523
ACPL_7625
Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.
  
  
 0.507
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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