STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_480Flp pilus assembly protein TadB. (239 aa)    
Predicted Functional Partners:
ACPL_479
Flp pilus assembly protein, ATPase CpaF.
  
  
 0.911
ACPL_478
Septum site-determining protein minD; Septum formation inhibitor-activating ATPase.
 
     0.840
ACPL_5894
Hypothetical protein.
 
  
 0.741
ACPL_7815
Hypothetical protein.
  
  
 0.692
ACPL_482
Hypothetical protein.
     
 0.640
ACPL_5893
Lipid A export ATP-binding/permease protein msbA; Flp pilus assembly protein, ATPase CpaF.
  
  
 0.611
ACPL_481
Type II secretion system protein; Flp pilus assembly protein TadC.
 
     0.596
ACPL_4649
Response regulator receiver sensor signal transduction histidine kinase; Serine phosphatase RsbU, regulator of sigma subunit.
   
    0.563
ACPL_477
Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
  
    0.557
ACPL_8349
GPI mannosyltransferase 1; Predicted integral membrane protein.
  
     0.505
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.