STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4823Hypothetical protein. (547 aa)    
Predicted Functional Partners:
celB
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.747
ACPL_8125
Uncharacterized protein conserved in bacteria.
 
     0.743
ACPL_5471
Sphingomyelin phosphodiesterase 2.
  
     0.739
ACPL_400
Pectate lyase; Alpha-L-arabinofuranosidase.
 
  
 0.732
ACPL_4120
peptidyl-Lys metalloendopeptidase.
  
     0.732
ACPL_6911
Collagen alpha-4(VI) chain; Secreted and surface protein containing fasciclin-like repeats.
 
  
 0.727
ACPL_2103
Hypothetical protein; Lysophospholipase L1 and related esterases.
  
   
 0.716
ACPL_6763
PHB depolymerase family esterase; Poly(3-hydroxybutyrate) depolymerase.
  
     0.708
ACPL_2104
Hypothetical protein.
  
     0.702
ACPL_3005
Endoglucanase.
  
     0.695
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.