STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4824Putative 30.6 kDa protein in fumA 3'region; Predicted xylanase/chitin deacetylase. (251 aa)    
Predicted Functional Partners:
ACPL_4825
Vegetative incompatibility protein HET-E-1; FOG: WD40 repeat.
 
     0.859
ACPL_2424
ylxY-like uncharacterized protein; Predicted xylanase/chitin deacetylase.
  
     0.740
ACPL_3444
Putative mannan synthase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
  
    0.508
ACPL_4143
Putative mannan synthase 3; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.480
ACPL_3447
N-acetylglucosaminyltransferase; Glycosyltransferases, probably involved in cell wall biogenesis.
  
    0.465
ACPL_6113
Putative xyloglucan glycosyltransferase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.464
ACPL_4823
Hypothetical protein.
       0.450
ACPL_7803
Putative xyloglucan glycosyltransferase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
  
   
0.406
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.