STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4825Vegetative incompatibility protein HET-E-1; FOG: WD40 repeat. (413 aa)    
Predicted Functional Partners:
nrps1A
Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.878
nrps1B
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.878
ACPL_4824
Putative 30.6 kDa protein in fumA 3'region; Predicted xylanase/chitin deacetylase.
 
     0.859
ACPL_6195
Polyketide synthase modules and related proteins.
  
    0.828
qcrC
Cytochrome c, mono- and diheme variants.
  
 
 0.616
nrps2C
High-molecular-weight protein 2; Non-ribosomal peptide synthetase modules and related proteins.
  
    0.574
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.559
tycC
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.538
ACPL_2037
Uncharacterized protein conserved in bacteria.
  
     0.536
ppsC
Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.481
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.