STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xynDPredicted xylanase/chitin deacetylase. (340 aa)    
Predicted Functional Partners:
xlnB
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
    
0.797
ACPL_4099
Cellulase; Endoglucanase.
 
   
 0.428
ACPL_3444
Putative mannan synthase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.424
ACPL_3447
N-acetylglucosaminyltransferase; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.424
ACPL_4143
Putative mannan synthase 3; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.419
ACPL_4803
Glycosyltransferases involved in cell wall biogenesis.
  
    0.414
ACPL_6113
Putative xyloglucan glycosyltransferase 9; Glycosyltransferases, probably involved in cell wall biogenesis.
 
    0.410
ACPL_4849
Hypothetical protein.
       0.408
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.