ydaM protein (Actinoplanes sp. SE50110) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

ydaM

Diguanylate cyclase/phosphodiesterase; FOG: GGDEF domain. (476 aa)

Predicted Functional Partners:

ACPL_3288

0.792

ACPL_315

0.773

ACPL_3661

0.771

ACPL_1150

0.767

ACPL_6398

0.740

ACPL_4813

0.679

ACPL_2719

0.627

ACPL_3239

0.607

ACPL_5601

0.578

ACPL_4901

0.561

Your Current Organism:

Actinoplanes sp. SE50110

NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACPL_1150	ACPL_2719	ACPL_1150	ACPL_2719	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.760
ACPL_1150	ACPL_315	ACPL_1150	ACPL_315	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.759
ACPL_1150	ACPL_3239	ACPL_1150	ACPL_3239	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.470
ACPL_1150	ACPL_3288	ACPL_1150	ACPL_3288	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.761
ACPL_1150	ACPL_3661	ACPL_1150	ACPL_3661	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.758
ACPL_1150	ACPL_4813	ACPL_1150	ACPL_4813	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Putative signaling protein; FOG: EAL domain.	0.783
ACPL_1150	ACPL_5601	ACPL_1150	ACPL_5601	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Signaling protein ykoW; Predicted signal transduction protein containing sensor and EAL domains.	0.651
ACPL_1150	ACPL_6398	ACPL_1150	ACPL_6398	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Putative signaling protein; FOG: EAL domain.	0.455
ACPL_1150	ydaM	ACPL_1150	ACPL_4902	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	Diguanylate cyclase/phosphodiesterase; FOG: GGDEF domain.	0.767
ACPL_2719	ACPL_1150	ACPL_2719	ACPL_1150	Phytochrome-like protein cph2; FOG: EAL domain.	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.760
ACPL_2719	ACPL_315	ACPL_2719	ACPL_315	Phytochrome-like protein cph2; FOG: EAL domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.781
ACPL_2719	ACPL_3239	ACPL_2719	ACPL_3239	Phytochrome-like protein cph2; FOG: EAL domain.	Putative signaling protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.469
ACPL_2719	ACPL_3288	ACPL_2719	ACPL_3288	Phytochrome-like protein cph2; FOG: EAL domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.782
ACPL_2719	ACPL_3661	ACPL_2719	ACPL_3661	Phytochrome-like protein cph2; FOG: EAL domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.778
ACPL_2719	ACPL_4813	ACPL_2719	ACPL_4813	Phytochrome-like protein cph2; FOG: EAL domain.	Putative signaling protein; FOG: EAL domain.	0.769
ACPL_2719	ACPL_5601	ACPL_2719	ACPL_5601	Phytochrome-like protein cph2; FOG: EAL domain.	Signaling protein ykoW; Predicted signal transduction protein containing sensor and EAL domains.	0.665
ACPL_2719	ACPL_6398	ACPL_2719	ACPL_6398	Phytochrome-like protein cph2; FOG: EAL domain.	Putative signaling protein; FOG: EAL domain.	0.526
ACPL_2719	ydaM	ACPL_2719	ACPL_4902	Phytochrome-like protein cph2; FOG: EAL domain.	Diguanylate cyclase/phosphodiesterase; FOG: GGDEF domain.	0.627
ACPL_315	ACPL_1150	ACPL_315	ACPL_1150	Phytochrome-like protein cph2; FOG: EAL domain.	y4lL-like uncharacterized protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.	0.759
ACPL_315	ACPL_2719	ACPL_315	ACPL_2719	Phytochrome-like protein cph2; FOG: EAL domain.	Phytochrome-like protein cph2; FOG: EAL domain.	0.781