Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_4906Hypothetical protein; Acetyltransferases. (260 aa)    
Predicted Functional Partners:
infA
Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.
       0.801
ACPL_3735
Chitinase.
  
     0.540
ACPL_3800
Hypothetical protein.
  
     0.528
ACPL_2231
Activated CDC42 kinase 1; FOG: PKD repeat.
  
    0.527
ACPL_2232
Parallel beta-helix repeat protein.
  
    0.501
ACPL_4183
Transcriptional regulator.
  
     0.500
ACPL_1342
Bacillopeptidase F; Subtilisin-like serine proteases.
  
 
   0.480
ACPL_3312
Hypothetical protein.
  
     0.478
ACPL_131
Hypothetical protein.
  
     0.468
ACPL_6880
Hypothetical protein.
  
     0.463
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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