STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkBAlkane 1-monooxygenase. (369 aa)    
Predicted Functional Partners:
ACPL_7671
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
     
 0.900
ACPL_7755
NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
     
 0.900
ACPL_5396
Oxidoreductase FAD-binding domain protein; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
  
 0.635
ACPL_5678
Hypothetical protein; Sterol desaturase.
 
  
 0.627
ACPL_5397
Fatty acid desaturase.
  
     0.613
baeN
Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins.
  
  
 0.606
fadH
2,4-dienoyl-CoA reductase (NADPH2); NADH:flavin oxidoreductases, Old Yellow Enzyme family.
 
   
 0.563
ACPL_4911
TetR family transcriptional regulator.
  
    0.531
ACPL_5524
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; Predicted flavoprotein involved in K+ transport.
  
   
 0.504
ACPL_4462
Phosphoglycerate mutase 1.
  
     0.501
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.