STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4911TetR family transcriptional regulator. (182 aa)    
Predicted Functional Partners:
ACPL_1669
Hypothetical protein.
  
     0.648
alkB
Alkane 1-monooxygenase.
  
    0.531
ACPL_8204
Hypothetical protein; Fibronectin type 3 domain-containing protein.
  
     0.490
ACPL_5723
HTH-type transcriptional repressor Bm3R1; Transcriptional regulator.
  
     0.467
ACPL_8207
Hypothetical protein.
  
     0.464
ACPL_3762
Transcriptional regulator.
  
     0.449
ACPL_5739
Transcriptional regulator.
  
     0.444
glcI-2
Glucan endo-1,3-beta-D-glucosidase.
  
     0.436
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
  
     0.417
ACPL_3774
Hypothetical protein.
  
     0.414
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.