STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nprZinc metalloprotease (elastase)-like protein; Extracellular zinc metalloprotease. (507 aa)    
Predicted Functional Partners:
ACPL_3496
Hypothetical protein.
  
    0.508
ACPL_3500
3-oxoacyl-[acyl-carrier-protein] synthase 3.
  
     0.506
ACPL_4707
3-demethylubiquinone-9 3-methyltransferase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- benzoquinol methylase.
  
     0.492
ACPL_3495
Hypothetical protein.
  
    0.480
ACPL_2820
Protein tolB.
  
     0.475
ACPL_3494
Hypothetical protein.
  
    0.466
ACPL_1247
Putative secreted protein.
  
     0.454
ACPL_5152
Uncharacterized protein conserved in bacteria.
  
  
 0.448
ACPL_3497
Hypothetical protein.
  
     0.444
ACPL_1343
Uncharacterized protein conserved in bacteria.
  
     0.443
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.