STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4922Hypothetical protein. (176 aa)    
Predicted Functional Partners:
tetR-14
Tetracycline repressor protein class G; Transcriptional regulator.
 
     0.731
icsA
Glycogen synthase; Glycosyltransferase.
  
    0.520
ACPL_2633
Uncharacterized protein; Predicted nucleoside-diphosphate-sugar epimerases.
   
    0.487
ACPL_3955
Putative NADH-flavin reductase.
   
    0.487
ACPL_4570
Flavin reductase; Nucleoside-diphosphate-sugar epimerases.
   
    0.487
ACPL_4924
Putative oxidoreductase ordL; Glycine/D-amino acid oxidases (deaminating).
       0.466
icsA-2
Glycogen synthase; Glycosyltransferase.
  
    0.422
ACPL_7482
Putative NAD(P)H-dependent FMN-containing oxidoreductase ywqN; Multimeric flavodoxin WrbA.
  
     0.422
ACPL_350
Hypothetical protein.
  
     0.419
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.