Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACPL_4950Cysteine desulfurase family protein; Selenocysteine lyase. (400 aa)    
Predicted Functional Partners:
iscU
Similar to mitochondrial Iron sulfur cluster assembly protein 1; NifU homolog involved in Fe-S cluster formation.
 
 0.958
ACPL_1874
Spermidine/putrescine import ATP-binding protein potA; ABC-type oligopeptide transport system, ATPase component.
 
  
 0.885
sufB
ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.838
ACPL_1872
Uncharacterized protein; ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.797
ACPL_7393
Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
 0.723
sufE
SufE protein probably involved in Fe-S center assembly.
  
 0.670
csdB
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
  
 
0.628
ACPL_2281
Selenocysteine lyase.
  
  
 
0.626
ACPL_4951
Hypothetical protein.
       0.615
moeB
Molybdopterin biosynthesis-like protein MoeZ; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
 0.579
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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