Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACPL_4952 | ACPL_4953 | ACPL_4952 | ACPL_4953 | Monoamine oxidase. | Hypothetical protein. | 0.636 |
ACPL_4952 | baeN | ACPL_4952 | ACPL_6194 | Monoamine oxidase. | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | 0.432 |
ACPL_4953 | ACPL_4952 | ACPL_4953 | ACPL_4952 | Hypothetical protein. | Monoamine oxidase. | 0.636 |
ACPL_4953 | ACPL_7900 | ACPL_4953 | ACPL_7900 | Hypothetical protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.645 |
ACPL_4953 | ACPL_7923 | ACPL_4953 | ACPL_7923 | Hypothetical protein. | Chemotaxis protein motB; Flagellar motor protein. | 0.612 |
ACPL_4953 | ACPL_7924 | ACPL_4953 | ACPL_7924 | Hypothetical protein. | Chemotaxis protein motA; Flagellar motor component. | 0.575 |
ACPL_4953 | baeN | ACPL_4953 | ACPL_6194 | Hypothetical protein. | Thiotemplate mechanism natural product synthetase; Non-ribosomal peptide synthetase modules and related proteins. | 0.526 |
ACPL_4953 | flgK | ACPL_4953 | ACPL_7897 | Hypothetical protein. | Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family. | 0.560 |
ACPL_4953 | fliS | ACPL_4953 | ACPL_7901 | Hypothetical protein. | Flagellar protein fliS; Flagellin-specific chaperone FliS. | 0.673 |
ACPL_4953 | nrps1A | ACPL_4953 | ACPL_1013 | Hypothetical protein. | Amino acid adenylation domain-containing protein; Non-ribosomal peptide synthetase modules and related proteins. | 0.868 |
ACPL_4953 | nrps1B | ACPL_4953 | ACPL_1014 | Hypothetical protein. | Non-ribosomal peptide synthetase modules and related proteins. | 0.868 |
ACPL_4953 | tycC | ACPL_4953 | ACPL_4110 | Hypothetical protein. | Non-ribosomal peptide synthetase modules and related proteins. | 0.526 |
ACPL_7900 | ACPL_4953 | ACPL_7900 | ACPL_4953 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Hypothetical protein. | 0.645 |
ACPL_7900 | ACPL_7923 | ACPL_7900 | ACPL_7923 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Chemotaxis protein motB; Flagellar motor protein. | 0.968 |
ACPL_7900 | ACPL_7924 | ACPL_7900 | ACPL_7924 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Chemotaxis protein motA; Flagellar motor component. | 0.961 |
ACPL_7900 | flgK | ACPL_7900 | ACPL_7897 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family. | 0.983 |
ACPL_7900 | fliS | ACPL_7900 | ACPL_7901 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein fliS; Flagellin-specific chaperone FliS. | 0.993 |
ACPL_7923 | ACPL_4953 | ACPL_7923 | ACPL_4953 | Chemotaxis protein motB; Flagellar motor protein. | Hypothetical protein. | 0.612 |
ACPL_7923 | ACPL_7900 | ACPL_7923 | ACPL_7900 | Chemotaxis protein motB; Flagellar motor protein. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.968 |
ACPL_7923 | ACPL_7924 | ACPL_7923 | ACPL_7924 | Chemotaxis protein motB; Flagellar motor protein. | Chemotaxis protein motA; Flagellar motor component. | 0.999 |
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