STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4966Hypothetical protein; FOG: PKD repeat. (466 aa)    
Predicted Functional Partners:
ACPL_4965
Hypothetical protein.
 
     0.696
ACPL_974
Spermatogenesis-associated protein 20; Highly conserved protein containing a thioredoxin domain.
   
 
 0.681
chiA-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
   
 0.659
bglA
Beta-glucanase/Beta-glucan synthetase.
   
 0.592
ACPL_630
Pre-neck appendage protein.
  
     0.589
ACPL_3177
Ricin; Endoglucanase.
   
 0.586
chiB
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
   
 0.584
ACPL_4967
Transcriptional regulators.
 
     0.567
ACPL_4647
Abrin-c.
   
 0.564
ACPL_5183
Rhs family protein.
  
     0.546
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.