STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4974Hypothetical protein; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs. (79 aa)    
Predicted Functional Partners:
ACPL_4975
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
 
 
 0.992
ACPL_2777
Xanthine dehydrogenase YagR molybdenum-binding subunit; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
 
 
 0.963
xdhB
Xanthine dehydrogenase YagS FAD-binding subunit; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
 
 0.935
ACPL_4977
Hypothetical protein.
 
     0.588
ACPL_4976
Uncharacterized protein; Belongs to the UPF0145 family.
 
     0.587
ACPL_4978
Hypothetical protein.
       0.535
ACPL_1443
yqeB-like uncharacterized protein; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
 
  
 0.498
ACPL_4323
Histidine kinase.
  
     0.450
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 
 0.447
porA
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit.
     
 0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.