Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACPL_4976Uncharacterized protein; Belongs to the UPF0145 family. (298 aa)    
Predicted Functional Partners:
ACPL_4977
Hypothetical protein.
 
    
0.872
ACPL_4978
Hypothetical protein.
       0.821
ACPL_4089
Hypothetical protein.
  
     0.609
ACPL_4974
Hypothetical protein; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
 
     0.587
ACPL_4975
Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A.
       0.547
ACPL_6012
Peptidase S53 propeptide; Predicted protease.
  
     0.474
ACPL_4005
Ribonuclease BN; Predicted membrane protein.
  
     0.442
ACPL_5103
Hypothetical protein.
  
     0.442
ACPL_2646
Calcium-gated potassium channel mthK; Kef-type K+ transport systems, predicted NAD-binding component.
  
     0.440
uppP
Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
  
     0.424
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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