STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_4991Protein of unknown function DUF1469. (135 aa)    
Predicted Functional Partners:
ACPL_4990
Hypothetical protein.
 
     0.957
ACPL_4992
Hypothetical protein.
 
     0.957
ACPL_3771
Protein of unknown function DUF1469.
 
     0.641
ACPL_1458
Predicted membrane protein.
 
     0.555
ACPL_3457
Predicted membrane protein.
 
     0.554
ACPL_2948
Hypothetical protein.
  
     0.507
ACPL_4993
Permeases of the major facilitator superfamily.
       0.505
ACPL_4994
Hypothetical protein.
       0.505
tst
Rhodanese domain protein; Rhodanese-related sulfurtransferase.
      
 0.428
ACPL_8011
Hypothetical protein.
  
     0.406
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.