Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
abfB-2Arabinofuranosidase. (212 aa)    
Predicted Functional Partners:
ACPL_4742
alpha-L-arabinofuranosidase B catalytic; Endoglucanase.
 
    0.748
ACPL_3005
Endoglucanase.
  
     0.728
ACPL_3011
Hypothetical protein; Poly(3-hydroxybutyrate) depolymerase.
  
     0.721
ACPL_4729
alpha-L-arabinofuranosidase B catalytic; O-Glycosyl hydrolase.
 
  
  0.719
ACPL_400
Pectate lyase; Alpha-L-arabinofuranosidase.
  
    0.695
ACPL_4099
Cellulase; Endoglucanase.
 
 
 0.689
ACPL_6174
Poly(3-hydroxybutyrate) depolymerase.
  
     0.684
celA
Endoglucanase.
 
 
 0.661
celD-2
Endoglucanase E-4; Cellobiohydrolase A (1,4-beta-cellobiosidase A).
 
 
  0.656
ACPL_2621
Hypothetical protein.
  
     0.648
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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