Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5019Pectinesterase; Pectin methylesterase. (328 aa)    
Predicted Functional Partners:
ACPL_5020
Pectate lyase.
  
 0.985
pel
Pectate lyase/Amb allergen; Pectate lyase.
  
 0.972
ACPL_2701
Pectate lyase.
 
  
 0.962
ybhC
Putative pectinesterase; Pectin methylesterase.
  
  
 
0.927
ACPL_5719
Pectinesterase; Pectin methylesterase.
  
  
 
0.918
glcI
Glucan endo-1,3-beta-glucosidase; Uncharacterized protein conserved in bacteria.
  
     0.729
abnA
Arabinan endo-1,5-alpha-L-arabinosidase; Beta-xylosidase.
 
   
 0.684
ACPL_3008
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.669
ACPL_4519
Cellulose-binding family II; Alpha-L-arabinofuranosidase.
  
  
 0.643
ACPL_3660
Glycoside hydrolase family protein; Predicted beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.628
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.