STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5022Hypothetical protein. (190 aa)    
Predicted Functional Partners:
pknA-2
Serine/threonine protein kinase.
       0.773
ACPL_5021
Hypothetical protein.
       0.689
ACPL_5024
Serine hydroxymethyltransferase; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs.
       0.556
pknB
Serine/threonine protein kinase.
  
 
 0.470
ACPL_5073
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
   
 
 0.469
ACPL_5020
Pectate lyase.
       0.459
ACPL_5025
Hypothetical protein; Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.408
ACPL_1703
Serine/threonine protein kinase.
  
 
 0.401
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.