STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5035Conserved repeat domain protein. (707 aa)    
Predicted Functional Partners:
ACPL_5034
Myosin-1; Uncharacterized protein conserved in bacteria.
    
0.860
ACPL_8099
Peptidase S1 and S6 chymotrypsin/Hap; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
 
 
 0.616
ACPL_7712
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.593
ACPL_4523
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.586
dnaK-3
Molecular chaperone.
  
 
 0.574
ACPL_5036
Hypothetical protein.
       0.568
ACPL_2903
Peptidase S1 and S6 chymotrypsin/Hap; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.564
pepA
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.564
ACPL_6947
Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.564
hhoB
Peptidase S1 and S6 chymotrypsin/Hap; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.564
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.