STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5046yehL-like uncharacterized protein; MoxR-like ATPases. (370 aa)    
Predicted Functional Partners:
ACPL_5045
Hypothetical protein.
 
     0.948
coxE
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
  
 0.945
ACPL_5049
Hypothetical protein.
 
     0.928
ACPL_5048
Hypothetical protein.
 
     0.924
ACPL_6699
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
  
 0.803
ACPL_6697
yehM-like uncharacterized protein.
 
   
 0.792
ACPL_6695
Zinc finger SWIM domain protein.
 
     0.748
ACPL_3167
Uncharacterized protein conserved in bacteria.
  
     0.566
mhpA
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.527
ACPL_5044
y4lL-like uncharacterized protein; FOG: GGDEF domain.
       0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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