STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5067TPR repeat-containing protein; FOG: TPR repeat. (666 aa)    
Predicted Functional Partners:
ACPL_5648
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 
  0.617
ACPL_5066
Predicted membrane protein.
       0.603
dnaK-3
Molecular chaperone.
  
 0.596
ACPL_3980
Putative WD repeat-containing protein; FOG: WD40 repeat.
 
 0.586
htpG
Chaperone protein htpG; Molecular chaperone, HSP90 family.
  
 0.578
ACPL_6128
Putative WD repeat-containing protein; FOG: WD40 repeat.
  
 
  0.566
ACPL_6762
Hypothetical protein.
  
     0.533
capB
YwsC; UDP-N-acetylmuramyl tripeptide synthase.
  
     0.527
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
   
 0.516
asn1
Asparagine synthase (glutamine-hydrolyzing).
  
    0.492
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.