STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5072Predicted transcriptional regulators. (246 aa)    
Predicted Functional Partners:
ACPL_5073
Oxoglutarate dehydrogenase inhibitor; FOG: FHA domain.
 
    0.905
ACPL_1164
Uncharacterized protein; 4-aminobutyrate aminotransferase and related aminotransferases.
  
  
 0.869
ACPL_5071
Uncharacterized protein.
 
   
 0.777
ACPL_5070
Predicted transcriptional regulators.
 
   
 0.773
ACPL_5075
Uncharacterized protein conserved in bacteria.
 
     0.667
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
       0.589
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
   0.500
ACPL_7057
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
  
   
 0.495
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
      
 0.473
ACPL_3017
Uncharacterized protein conserved in bacteria.
  
     0.461
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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