STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_508Extracellular matrix-binding protein ebhB; Predicted membrane protein. (1475 aa)    
Predicted Functional Partners:
ACPL_509
Hypothetical protein.
       0.773
ACPL_4957
Hypothetical protein.
  
     0.628
modR
Regulatory protein afsR.
  
     0.599
aac
Aminoglycoside 2'-N-acetyltransferase; Predicted acyltransferase.
  
     0.544
ACPL_6598
Aminoglycoside phosphotransferase.
  
     0.522
ACPL_1229
Alpha-1,2-mannosidase.
 
     0.499
ACPL_5431
Hypothetical protein.
  
     0.472
ACPL_4358
Alpha-1,2-mannosidase.
 
     0.464
ACPL_5842
Teneurin-3; Rhs family protein.
 
     0.458
bglC
Glycoside hydrolase family protein; Endoglucanase.
  
   0.455
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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