STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5103Hypothetical protein. (460 aa)    
Predicted Functional Partners:
ACPL_5102
Hypothetical protein.
       0.816
thcR
XylDLEGF operon transcriptional activator 3; AraC-type DNA-binding domain-containing proteins.
       0.777
ACPL_5104
Hypothetical protein.
       0.728
ACPL_5100
NTP pyrophosphohydrolases including oxidative damage repair enzymes; Belongs to the Nudix hydrolase family.
       0.572
ACPL_5342
Eukaryotic translation initiation factor 3 subunit A.
  
     0.538
ACPL_4977
Hypothetical protein.
  
     0.534
ACPL_5105
Uncharacterized protein conserved in bacteria.
       0.489
ACPL_4976
Uncharacterized protein; Belongs to the UPF0145 family.
  
     0.442
ACPL_2833
Uncharacterized protein conserved in bacteria.
  
     0.409
ACPL_464
Cortactin-binding protein 2; Type V secretory pathway, adhesin AidA.
  
 
 
 0.409
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.