STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5105Uncharacterized protein conserved in bacteria. (297 aa)    
Predicted Functional Partners:
chiB
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.734
chiD
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.691
chiA-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.673
chiC
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.626
chiA-3
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.616
chiD-2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.611
ACPL_1477
Cellulose-binding family II; Chitinase.
 
  
 0.608
ACPL_5345
Glycoside hydrolase family protein; Cellobiohydrolase A (1,4-beta-cellobiosidase A); Belongs to the glycosyl hydrolase family 6.
  
     0.580
pel
Pectate lyase/Amb allergen; Pectate lyase.
  
   
 0.580
ACPL_8160
Cellulose-binding family II; Uncharacterized protein conserved in bacteria.
 
  
 0.564
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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