STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_5124Hypothetical protein. (543 aa)    
Predicted Functional Partners:
ACPL_1311
Hypothetical protein.
  
     0.603
ACPL_8329
Putative integral membrane protein.
  
   
 0.601
ACPL_8349
GPI mannosyltransferase 1; Predicted integral membrane protein.
  
   
 0.548
ACPL_1574
Predicted integral membrane protein.
  
   
 0.507
ACPL_7122
Hypothetical protein.
  
     0.501
ACPL_7109
Hypothetical protein.
  
   
 0.492
ACPL_1683
Hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
   
 0.490
ACPL_8083
Hypothetical protein.
  
 
   0.441
ACPL_1203
Uncharacterized protein conserved in bacteria.
  
     0.434
ACPL_8099
Peptidase S1 and S6 chymotrypsin/Hap; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
   0.434
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.