STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimBPhosphatidylinositol alpha 1, 6-mannosyltransferase; Glycosyltransferase. (383 aa)    
Predicted Functional Partners:
pimC
Glycosyl transferase, group 1; Glycosyltransferase.
 
    
0.726
treZ
Maltooligosyltrehalose trehalohydrolase; 1,4-alpha-glucan branching enzyme.
   
 0.536
glgB
1,4-alpha-glucan branching enzyme.
   
 0.525
glgB-2
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.525
ugd
UDPglucose 6-dehydrogenase; UDP-N-acetyl-D-mannosaminuronate dehydrogenase.
 
  
 0.511
udgA
Predicted UDP-glucose 6-dehydrogenase.
 
  
 0.509
ACPL_7082
Isoamylase N-terminal domain-containing protein; 1,4-alpha-glucan branching enzyme.
   
 0.493
ACPL_5126
Hypothetical protein.
       0.485
ACPL_1656
Nucleotidyl transferase; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
  
 0.403
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.