STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACPL_513Hypothetical protein. (66 aa)    
Predicted Functional Partners:
ACPL_512
Hypothetical protein.
       0.779
ACPL_3489
Hypothetical protein.
  
     0.720
ACPL_1135
Hypothetical protein.
  
     0.597
ACPL_515
Helix-turn-helix domain-containing protein.
 
     0.547
ACPL_1496
Nephrocystin-3; FOG: TPR repeat.
  
     0.538
ACPL_1499
Nephrocystin-3; FOG: TPR repeat.
  
     0.525
ACPL_156
Hypothetical protein.
  
     0.515
ACPL_6977
Hypothetical protein.
  
     0.493
ACPL_514
Hypothetical protein.
 
    
0.475
ACPL_1351
RNA pyrophosphohydrolase; ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family.
  
     0.468
Your Current Organism:
Actinoplanes sp. SE50110
NCBI taxonomy Id: 134676
Other names: A. sp. SE50/110, Actinoplanes sp. (strain 50/110), Actinoplanes sp. 50/110, Actinoplanes sp. SE50/110
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.